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The raw materials, pharmaceutical ingredients, and active ingredients used in the manufacture of nutritional and dietary articles may range from chemically synthesized vitamins to plant extracts and animal byproducts, and these ingredients are typically not sterile. Considerable experience has accrued with these highly refined plant- and animal-derived pharmaceutical ingredients, such as microcrystalline cellulose, modified starch, lactose, and magnesium stearate, and their microbiological attributes are well established. Botanicals may be microbiologically contaminated at any point during cultivation, harvesting, processing, packing, and distribution. Major sources of microbial contamination are associated with human or animal feces used as plant manure, contaminated irrigation water and/or process water, and poor worker hygiene and sanitation practices during harvesting, sorting, processing, packaging, and transportation. Furthermore, it is essential that microbiological contamination be minimized during the manufacture of nonsterile dietary supplements. To achieve this, Good Manufacturing Practices are employed and adequate microbiological specifications are established.
Microbiological process control, control of the bioburden of raw materials, and control of the manufacturing process to minimize cross-contamination are necessary to guarantee acceptable microbial quality in the final dosage forms. Because nonaqueous or dry dosage forms do not support microbial growth because of low water activity, the microbial quality of such articles is a function of the microorganisms introduced through ingredients or during processing. In addition to considering the intended use of the product, the frequency of microbial testing for the finished nonsterile dietary supplement would be a function of the historical microbial testing database of that product, knowledge of the manufacturing processes, the susceptibility of the formulation to microbial proliferation, and the demonstrated effectiveness of programs controlling the raw materials.

From a microbiological perspective, the development of the formulation of nutritional or dietary supplements includes an evaluation of raw materials and their suppliers and the contribution made to the products by each ingredient and the manufacturing processes. Characterization of these elements allows the adequacy of the manufacturing process to be demonstrated. For example, if a product is formulated with an ingredient of botanical or animal origin known to possess a high, variable, or unpredictable level of microbiological contamination, it is necessary to ensure that the microbiological monitoring identifies ingredients that have an inappropriate bioburden level and that a premanufacturing process such as drying, extraction, heat treatment, irradiation, or gaseous sterilization treatment will inactivate or remove any objectionable contaminant possibly present.
However, the selected treatment technique should not have any adverse effects. The treatment of raw materials by irradiation and ethylene oxide may cause unwanted changes affecting the safety and efficacy of the raw material. For instance, when treated by ethylene oxide, crude extracts containing alkaloids have shown reduced contents of alkaloids. Dry heat treatment has been used for inactivation as well, but it requires further evaluation because it may adversely affect stability and degradation of the raw material. With regard to the design of the manufacturing process, appropriate consideration should be given to the microbiological effect of wet granulation manufacturing processes. Wetting of a dry powder can result in increased levels of microorganisms if the granulation is stored prior to drying. However, it is recognized that the pressure and temperature associated with compression of tablets will decrease microbial counts. Antimicrobial activity is also achieved, especially with aqueous preparations, by the addition of chemicals that have known antimicrobial properties and that are compatible with the formulation.
However, antimicrobial preservation is not a substitute for Good Manufacturing Practices. A process has to be designed to minimize the microbiological population. Operating procedures and temperatures and time limits, including holding times, are established to protect the product from microbiological contamination and growth. All processes have to be validated for their intended purposes. Moreover, in-process manufacturing and testing controls necessary for microbiological quality should be identified and implemented.

Facilities— The facilities, including the building and the heating, ventilation, and air-conditioning (HVAC) systems, should be designed to minimize microbiological contamination. The design of facilities used for the manufacture of supplements and their operating parameters should be documented, and the documentation should include, when appropriate, HVAC filter types, space pressure differentials, temperature, and relative humidity and air changes. Dry products processed in a dry environment do not possess a high potential for increased microbial levels. However, some control is warranted to minimize microbiological and chemical contamination. Potentially problematic areas are those that utilize Purified Water for wet granulation, batching liquid products, and film-coating tablets, because water encourages microbial growth.
Equipment— Equipment used for the processing of semisolid and dry supplements should be designed to promote sanitary conditions, to be self-drying, and to be easy to clean. Dryers, ovens, wet granulation equipment, bulk tanks, and equipment for preparation of coating solutions are periodically evaluated to ensure that cleaning procedures are adequate.
Water— As one of the major components in nutritional and dietary supplement manufacturing processes, water deserves a special consideration in the microbiological control of these articles. It is a growth medium for a variety of microorganisms that present a threat to product quality, safety, preservation, and stability. Water may even act as a carrier of objectionable microorganisms. In view of this, water used in manufacturing is Purified Water. For the manufacture of raw materials, process water that meets specific microbiological objectives and U.S. Environmental Protection Agency National Drinking Water standards or equivalent European and Japanese standards may be used.
Cleaning and Sanitization— Detailed and specific cleaning and sanitization procedures should be evaluated, developed, and validated, with special attention given to product contact surfaces. Personnel should possess sufficient knowledge of these procedures.
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Raw materials, excipients, and active substances as components of nutritional and dietary supplements can be a primary source of microbiological contamination. Specifications should be developed and sampling plans and test procedures should be employed to guarantee the desired microbiological attributes of these materials. The nature and extent of microbiological testing should be based upon a knowledge of the material’s origin, its manufacturing process, its use, and historical data and experience. For instance, materials of animal or botanical origin that are not highly refined might require special, more frequent testing than synthetic products.
Since members of the family Enterobacteriaceae are a major component of the normal epiphytic and endophytic microflora (e.g., members of genera Klebsiella, Enterobacter, and Erwinia) and have been associated with the seeds, pods, roots, leaves, and stems of plants of economic importance, Coliform or Enterobacteriaceae counts will not be an appropriate general microbiological criterion for botanicals. However, when it is considered advantageous, Coliform or Enterobacteriaceae counts may be included in the individual monographs. Typically on new leaves, bacteria predominate in the microflora, while yeast and filamentous fungi succeed bacteria and become dominant late in the growing season. With dried botanicals, the bacterial population will tend to change from Gram-negative bacteria to Gram-positive spore formers and fungi. Refinement of botanicals from chopped or powdered plant material to powdered extracts using alcoholic, alkaline, acid hydro-alcoholic, or aqueous extracting materials will reduce the likelihood of vegetative microorganisms within the botanical material. The classification of botanical materials is contained in Table 1.
Table 1. Definitions of a Range of Botanical Materials
Botanical Preparation Definition
Chopped or Powdered
Hand-picked portions of the botanical (e.g., leaves, flowers, roots,
tubers, etc.) that are air dried, and chopped, flaked, sectioned,
ground, or pulverized to the consistency of a powder.
Botanical Extracts Extracts are solids or semisolid preparations of a botanical that are pre-
pared by percolation, filtration, and concentration by evaporation
of the percolate. The extracting material may by alcoholic, alkaline,
acid hydro-alcoholic, or aqueous in nature. Typically an extract
is 4 to 10 times as strong as the original botanical. The extracts
may be semisolids or dry powders termed powdered extracts.
Tinctures Tinctures are solutions of botanical substances in alcohol obtained by
extraction of the powdered, flaked, or sectioned botanical.
Infusions Infusions are solutions of botanical principles obtained by soaking
the powdered botanical in hot or cold water for a specified time and
straining. Typically infusions are 5% in strength.
Decoctions Decoctions are solutions of botanicals prepared by boiling the material
in water for at least 15 minutes and straining. Typically decoctions
are 5% in strength.
Fluidextracts A fluidextract is an alcoholic liquid extract made by percolation of a
botanical so that 1 mL of the fluidextract represents 1 g of the
Botanicals to be treated with boiling water before useUSP29 Dried botanicals to which boiling water is added immediately prior to
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Frequency of Sampling and Testing
Microbiological attribute sampling and testing plans vary widely. In some cases no sampling or testing is necessary; in other cases periodic monitoring is warranted; and yet for some articles each batch requires sampling and testing. The design of the sampling and testing plans and the kind of attributes examined depend on the application and the type of the product, the potential for contamination from components and processing, the growth promotion or inhibition properties of the formulation, and the target population for the supplement. For example, a powdered botanical may have highly variable microbiological attributes so that an incoming batch would be sampled and composite testing would not be advised, while a highly refined botanical extract may not require routine microbial testing. Similarly, products with a low water activity will not be susceptible to microbial growth during their shelf life provided they are protected from elevated humidity by their containers.
Microbial Enumeration Tests
See the Introduction under Microbial Enumeration Tests—Nutritional and Dietary Supplements 2021. These tests provide meaningful information regarding the microbiological acceptability of excipients, active substances, and nonsterile supplement formulations. If the individual monograph does not specify microbial enumeration limits, the guidance provided in this chapter is used. Acceptable general limits of microbial levels for raw materials, excipients, and botanical products are shown in Table 2; and those for raw materials, excipients, active ingredients, and other nonsterile finished articles that are nutritional supplements but do not contain botanicals are shown in Table 3.
Table 2. Recommended Microbial Limits for Botanical Ingredients and Products
Material Recommended Microbial Limit Requirements
(cfu/g or mL)
Dried or Powdered Botanicals
Total Aerobic Microbial Count NMT 105
Total Combined Yeast & Mold Count NMT 103
Bile-tolerant Gram-negative Bacteria NMT 103
Absence of Salmonella spp. & E. coli in 10 g
Powdered Botanical Extracts
Total Aerobic Microbial Count NMT 104
Total Combined Yeast & Mold Count NMT 103
Absence of Salmonella spp. & E. coli in 10 g
Total Aerobic Microbial Count NMT 104
Total Combined Yeast & Mold Count NMT 103
Total Aerobic Microbial Count NMT 104
Total Combined Yeast & Mold Count NMT 103
Total Aerobic Microbial Count NMT 102
Total Combined Yeast & Mold Count NMT 10
Nutritional Supplements with Botanicals
Total Aerobic Microbial Count NMT 104
Total Combined Yeast & Mold Count NMT 103
Absence of Salmonella spp & E. coli in 10 g
Botanicals to be treated with boiling water before useUSP29
Total Aerobic Microbial Count NMT 105
Total Combined Yeast & Mold Count NMT 103
Absence of E. coli in 10 g
Table 3. Recommended Microbial Limits for Dietary Supplement Ingredients and Products
Material Recommended Microbial Limit Requirements
(cfu/g or mL)
Other raw materials and dietary
supplement ingredients
Total Aerobic Microbial Count NMT 103
Total Combined Yeast & Mold Count NMT 102
Absence of E. coli in 10 g
Nutritional supplements with synthetic or
highly refined ingredients
Total Aerobic Microbial Count NMT 103
Total Combined Yeast & Mold Count NMT 102
Absence of E. coli in 10 g
Absence of Objectionable Microorganisms
See Introduction under Microbiological Procedures for Absence of Specified Microorganisms—Nutritional and Dietary Supplements 2022. Absence of one or more species of objectionable microorganisms is required in some individual monographs.
Test for Aflatoxins— Dietary and nutritional articles containing botanical products with a history of mycotoxin contamination are also typically tested for aflatoxins, especially if the material is obtained from roots or rhizomes. See Articles of Botanical Origin 561 for the details of a test for aflatoxins. Where necessary, this test is included in the individual monograph.
Solid Oral Dosage Forms— Among all dosage forms, solid oral dosage forms present the lowest microbiological risk because of their method of manufacture, low water activity, and route of administration. When justified, reduced microbiological testing may be appropriate.
Other Concerns— The presence of some microorganisms in articles can be an indicator of processes that are not under microbiological control. For example, Purified Water used at some stage of the manufacture of these products might contain a typical flora of Gram-negative microorganisms. As with pharmaceutical products, inadequate processing of water and poor maintenance of water systems may result in the contamination of processed formulations by Gram-negative microorganisms.

Auxiliary Information—
Staff Liaison : Radhakrishna S Tirumalai, Scientist
Expert Committee : (MSA05) Microbiology and Sterility Assurance
USP29–NF24 Page 3087
Pharmacopeial Forum : Volume No. 30(5) Page 1818
Phone Number : 1-301-816-8339